CDS
| Accession Number | TCMCG066C38591 |
| gbkey | CDS |
| Protein Id | XP_034572875.1 |
| Location | join(53499891..53500369,53501316..53501388,53501470..53501526,53502284..53502339,53503742..53503955,53504075..53504161,53504237..53504311,53504394..53504477,53505168..53505232,53505941..53506163,53506300..53506388,53506790..53506904,53507002..53507037) |
| Gene | LOC117837371 |
| GeneID | 117837371 |
| Organism | Setaria viridis |
Protein
| Length | 550aa |
| Molecule type | protein |
| Topology | linear |
| Data_file_division | PLN |
| dblink | BioProject:PRJNA633601 |
| db_source | XM_034716984.1 |
| Definition | RNA-binding protein 39-like [Setaria viridis] |
EGGNOG-MAPPER Annotation
| COG_category | A |
| Description | linker between RRM2 and RRM3 domains in RBM39 protein |
| KEGG_TC | - |
| KEGG_Module | - |
| KEGG_Reaction | - |
| KEGG_rclass | - |
| BRITE |
ko00000
[VIEW IN KEGG] ko03041 [VIEW IN KEGG] |
| KEGG_ko |
ko:K13091
[VIEW IN KEGG] |
| EC | - |
| KEGG_Pathway | - |
| GOs |
GO:0005575
[VIEW IN EMBL-EBI] GO:0005622 [VIEW IN EMBL-EBI] GO:0005623 [VIEW IN EMBL-EBI] GO:0005634 [VIEW IN EMBL-EBI] GO:0005654 [VIEW IN EMBL-EBI] GO:0016604 [VIEW IN EMBL-EBI] GO:0016607 [VIEW IN EMBL-EBI] GO:0031974 [VIEW IN EMBL-EBI] GO:0031981 [VIEW IN EMBL-EBI] GO:0043226 [VIEW IN EMBL-EBI] GO:0043227 [VIEW IN EMBL-EBI] GO:0043229 [VIEW IN EMBL-EBI] GO:0043231 [VIEW IN EMBL-EBI] GO:0043233 [VIEW IN EMBL-EBI] GO:0044422 [VIEW IN EMBL-EBI] GO:0044424 [VIEW IN EMBL-EBI] GO:0044428 [VIEW IN EMBL-EBI] GO:0044446 [VIEW IN EMBL-EBI] GO:0044451 [VIEW IN EMBL-EBI] GO:0044464 [VIEW IN EMBL-EBI] GO:0070013 [VIEW IN EMBL-EBI] |
Sequence
| CDS: ATGGACTTCGACGAGTACGAGTACCTTGAGAAGACGGTGGAAGCGTCCGGGGTGCCGTCCAACGGCGCCGCGGCCCCCGGGTCGGGGGAGAAGGAGAAGGACAAGGAGCGCAGCTCCCGCCGCCGCTCCTCGGGCGGCGACGAAGAGCGCGACGACGTCGAGCGCAGATCTAAGCGTTCTCGCTCCGAGGAAGGCCGCGACCGCGACAAGGAGCGGCACCGGGATCGGCACCGGGACCGCGACCGGCACCGCAGCAGTCGGGAGCGGCGAGACCGGGATCGCGACGACAAGGAGAAAGAGCGGGAGAGGGACAAGGACAGGAGGAGCCGTGATCGCGATCGCGAACGGGAGAAGGAGAAGGAGAAGGAGAAGGAGAGGGAGCGGGGGAGGGAGAAGGATAGGCAGCGGAGGAGCCGGAGCCGGTCGGAGCGGCGGCGTGATGACGAAGAGCGTGACCGCTACCGTGACCGCGATGTCAGACGTAGGAAAGAGGAGGCTGCGGAACCTGAAGTTGATCCTGAAAGAGATCAGAGAACTGTGTTTGCTTACCAGTTATCTTTGAAGGCAGATGAAAGAGACGTGTACGAGTTCTTTTCTAGGGCTGGAAAGGTCCGGGATGTTCGCCTCATTATGGATCGAAATTCACGTCGTTCTAAAGGAGTTGGGTACATTGAATTCTACGACGCTATGTCTGTTCCAATGGCGATAGCTCTTTCTGGTCAGCTGCTTCTTGGTCAACAAGTAATGGTTAAGCCTTCAGAGGCTGAAAAGAATTTAGTCCAGTCAACTGCTTCTTCAAGTGGAGCCGCTTCAGGTGGAGCAAGGAAGTTGTATGTTGGAAATCTTCACTCCAACATTAATGAGGAACAATTGCGACAGGTCTTCGAACCATTTGGGCAAGTGGAGCTTGTCCAGCTGCCGTTAGATCCACTGACTGGGCTATGCAAAGGTTTTGGTTTTGTGCAGTTTGCACGCCTTGAAGATGCAAAAGCGGCTCAGAGTTTAAATGGACAACTTGATATTGCAGGGAGAGTAATTAAGGTTTCAGCTGTGACTGACCAAGCGGGTATGCAAGTTAGTGGAGCAACTACTGGAGATTTGGATGATGATGAAGGTGGAGGCTTGGCACTGAATGCTAGTTCCAGAGCACTTCTTATGCAGAAATTAGACCGGAGTGGCATTACAACCAGTTTGGCTGGTGGGATGGGCACTGCTAGTTTGAATACTCCGGTTGGAATACCAGCTGTATCTGTCCTTGGTGCTGCTCCAGCTACAGCTCCTGTTCTGCACCCTACCGTGCCTGGTCTTGGTTCAATTCCTGGGGCAACTCTTCCAATTTCTACCCCGTCTATTGAGTTGGCTCCACCTAGTGAATGCTTATTGCTGAAGAATATGTTTGATCCAGCTGTAGAGACGGATCCTGATTTTGATTTGGATATTAGGGATGATGTTCAGGACGAATGTTCCAAGTTTGGCCAATTAAAGCACATTTTTGTAGACAAAAATACTGCAGGTTTTGTGTACCTTCGGTTTGATAGCATAACAGCAGCTATGAGTGCACAGAAAGCACTTCACGGAAGATGGTTTGCGGGGAAGATGATTACAGCAACTTTCATGACGCCCCAGCAGTATGAAATGAAGTTCCCAAGCTAG |
| Protein: MDFDEYEYLEKTVEASGVPSNGAAAPGSGEKEKDKERSSRRRSSGGDEERDDVERRSKRSRSEEGRDRDKERHRDRHRDRDRHRSSRERRDRDRDDKEKERERDKDRRSRDRDREREKEKEKEKERERGREKDRQRRSRSRSERRRDDEERDRYRDRDVRRRKEEAAEPEVDPERDQRTVFAYQLSLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYIEFYDAMSVPMAIALSGQLLLGQQVMVKPSEAEKNLVQSTASSSGAASGGARKLYVGNLHSNINEEQLRQVFEPFGQVELVQLPLDPLTGLCKGFGFVQFARLEDAKAAQSLNGQLDIAGRVIKVSAVTDQAGMQVSGATTGDLDDDEGGGLALNASSRALLMQKLDRSGITTSLAGGMGTASLNTPVGIPAVSVLGAAPATAPVLHPTVPGLGSIPGATLPISTPSIELAPPSECLLLKNMFDPAVETDPDFDLDIRDDVQDECSKFGQLKHIFVDKNTAGFVYLRFDSITAAMSAQKALHGRWFAGKMITATFMTPQQYEMKFPS |